One of the most common spontaneous lesions that occurs in DNA under physiological conditions is the hydrolysis of the amino group of cytosine, converting the cytosine to uracil. What would be the effect on DNA structure of a uracil group replacing cytosine?
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Understand the context: Cytosine is one of the four nitrogenous bases in DNA, and it pairs with guanine through three hydrogen bonds. Uracil, on the other hand, is typically found in RNA and pairs with adenine. The replacement of cytosine with uracil in DNA can disrupt normal base pairing.
Recognize the chemical change: The hydrolysis of the amino group from cytosine converts it into uracil. This process is known as deamination. The chemical structure of uracil lacks the amino group present in cytosine, which is critical for its specific pairing with guanine.
Analyze the pairing disruption: When uracil replaces cytosine, it can no longer form the same hydrogen bonds with guanine. Instead, uracil may pair with adenine during DNA replication, leading to a mutation known as a transition mutation.
Consider the structural impact: The replacement of cytosine with uracil does not significantly alter the overall double-helix structure of DNA, but it introduces a mismatch in the base pairing, which can be recognized and repaired by DNA repair mechanisms such as base excision repair.
Evaluate the biological consequences: If the uracil is not repaired, the mismatch can lead to permanent mutations in the DNA sequence after replication. This can affect gene expression and potentially lead to diseases such as cancer if the mutation occurs in a critical gene.
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Key Concepts
Here are the essential concepts you must grasp in order to answer the question correctly.
DNA Structure
DNA is composed of nucleotides, which include a sugar, a phosphate group, and a nitrogenous base. The four nitrogenous bases are adenine, thymine, cytosine, and guanine. The specific pairing of these bases (A with T and C with G) is crucial for maintaining the double helix structure and ensuring accurate DNA replication and transcription.
Base pairing rules dictate how nitrogenous bases pair with each other in DNA. Cytosine pairs with guanine through three hydrogen bonds, while thymine pairs with adenine through two hydrogen bonds. If cytosine is replaced by uracil, which pairs with adenine instead of guanine, this alteration can lead to mismatches during DNA replication, potentially resulting in mutations.
Cells have evolved various DNA repair mechanisms to correct spontaneous lesions, such as the conversion of cytosine to uracil. One such mechanism is base excision repair, which recognizes and removes uracil from DNA, replacing it with the correct cytosine. Understanding these repair processes is essential for comprehending how cells maintain genetic integrity despite spontaneous mutations.