If you had a sample of RNA to analyze, which of the following techniques would you most likely use?
Table of contents
- 1. Introduction to Genetics51m
- 2. Mendel's Laws of Inheritance3h 37m
- 3. Extensions to Mendelian Inheritance2h 41m
- 4. Genetic Mapping and Linkage2h 28m
- 5. Genetics of Bacteria and Viruses1h 21m
- 6. Chromosomal Variation1h 48m
- 7. DNA and Chromosome Structure56m
- 8. DNA Replication1h 10m
- 9. Mitosis and Meiosis1h 34m
- 10. Transcription1h 0m
- 11. Translation58m
- 12. Gene Regulation in Prokaryotes1h 19m
- 13. Gene Regulation in Eukaryotes44m
- 14. Genetic Control of Development44m
- 15. Genomes and Genomics1h 50m
- 16. Transposable Elements47m
- 17. Mutation, Repair, and Recombination1h 6m
- 18. Molecular Genetic Tools19m
- 19. Cancer Genetics29m
- 20. Quantitative Genetics1h 26m
- 21. Population Genetics50m
- 22. Evolutionary Genetics29m
18. Molecular Genetic Tools
Methods for Analyzing DNA
Problem E.2
Textbook Question
Compare and contrast the terms Paternity Index (PI) and Combined Paternity Index (CPI). How does each contribute to paternity determination?

1
Define the Paternity Index (PI) as a likelihood ratio that compares the probability of observing the genetic evidence if the tested man is the biological father versus if he is not. It is calculated for each genetic marker separately.
Explain that the Combined Paternity Index (CPI) is the product of all individual Paternity Indices across multiple genetic markers, providing an overall likelihood ratio that summarizes the genetic evidence from the entire DNA profile.
Discuss how the PI helps evaluate the strength of evidence at a single locus, indicating how much more likely the tested man is the father compared to a random man from the population for that specific marker.
Describe how the CPI integrates information from multiple loci to increase the accuracy and reliability of paternity determination, as combining multiple PIs reduces the chance of coincidental matches.
Conclude by explaining that both PI and CPI contribute to paternity determination by quantifying the genetic evidence, where a higher CPI indicates stronger support for paternity, often used alongside statistical thresholds to make legal or clinical decisions.

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Key Concepts
Here are the essential concepts you must grasp in order to answer the question correctly.
Paternity Index (PI)
The Paternity Index (PI) is a likelihood ratio that compares the probability of observing a child's genetic marker if the tested man is the biological father versus if he is not. It is calculated for each genetic locus and reflects the strength of evidence supporting paternity at that specific marker.
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Combined Paternity Index (CPI)
The Combined Paternity Index (CPI) is the product of individual Paternity Indices across multiple genetic loci. It aggregates the evidence from all tested markers to provide an overall likelihood ratio, offering a more robust and reliable measure for paternity determination.
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Role of PI and CPI in Paternity Determination
PI and CPI quantify genetic evidence to assess paternity. While PI evaluates each locus separately, CPI combines these to strengthen conclusions. High CPI values indicate strong support for paternity, aiding legal and forensic decisions by providing statistical confidence.
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