Which of the following proteins is responsible for synthesizing RNA primers?
Table of contents
- 1. Introduction to Genetics51m
- 2. Mendel's Laws of Inheritance3h 37m
- 3. Extensions to Mendelian Inheritance2h 41m
- 4. Genetic Mapping and Linkage2h 28m
- 5. Genetics of Bacteria and Viruses1h 21m
- 6. Chromosomal Variation1h 48m
- 7. DNA and Chromosome Structure56m
- 8. DNA Replication1h 10m
- 9. Mitosis and Meiosis1h 34m
- 10. Transcription1h 0m
- 11. Translation58m
- 12. Gene Regulation in Prokaryotes1h 19m
- 13. Gene Regulation in Eukaryotes44m
- 14. Genetic Control of Development44m
- 15. Genomes and Genomics1h 50m
- 16. Transposable Elements47m
- 17. Mutation, Repair, and Recombination1h 6m
- 18. Molecular Genetic Tools19m
- 19. Cancer Genetics29m
- 20. Quantitative Genetics1h 26m
- 21. Population Genetics50m
- 22. Evolutionary Genetics29m
8. DNA Replication
Overview of DNA Replication
Problem 1c
Textbook Question
In the discussion, we focused on how DNA is replicated and synthesized. We also discussed recombination at the DNA level. Along the way, we encountered many opportunities to consider how this information was acquired. On the basis of these discussions, what answers would you propose to the following fundamental questions?
How do we know that in vivo DNA synthesis occurs in the 5' to 3' direction?

1
Understand the concept of DNA synthesis: DNA synthesis involves the addition of nucleotides to a growing DNA strand during replication. This process is catalyzed by DNA polymerase enzymes.
Review the structure of DNA: DNA strands have directionality, with one end labeled 5' (five prime) and the other 3' (three prime). The 5' end has a phosphate group, while the 3' end has a hydroxyl (-OH) group attached to the sugar molecule.
Examine the role of DNA polymerase: DNA polymerase can only add nucleotides to the 3' hydroxyl group of the growing strand. This restriction means that DNA synthesis proceeds in the 5' to 3' direction, as new nucleotides are added to the 3' end.
Consider experimental evidence: Experiments using radiolabeled nucleotides and DNA synthesis inhibitors have demonstrated that DNA polymerase activity occurs exclusively in the 5' to 3' direction. For example, studies with chain-terminating nucleotides (like dideoxynucleotides) show that synthesis stops when the 3' hydroxyl group is unavailable.
Reflect on the implications for replication: The 5' to 3' directionality of DNA synthesis ensures accurate replication and allows for the leading and lagging strand synthesis during the replication process. This mechanism is essential for maintaining genetic fidelity.

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Key Concepts
Here are the essential concepts you must grasp in order to answer the question correctly.
DNA Replication Directionality
DNA replication occurs in the 5' to 3' direction due to the structure of DNA polymerases, the enzymes responsible for synthesizing new DNA strands. These enzymes can only add nucleotides to the 3' end of a growing DNA strand, which means that the template strand must be read in the 3' to 5' direction. This inherent directionality is crucial for maintaining the fidelity and efficiency of DNA replication.
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Steps to DNA Replication
Role of DNA Polymerase
DNA polymerase is the key enzyme that catalyzes the synthesis of new DNA strands during replication. It requires a primer with a free 3' hydroxyl group to initiate synthesis, which reinforces the 5' to 3' directionality. Different types of DNA polymerases exist, each with specific functions, such as proofreading and repairing DNA, ensuring the integrity of the genetic material.
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DNA Proofreading
Experimental Evidence for Directionality
Experimental evidence supporting the 5' to 3' direction of DNA synthesis includes studies using labeled nucleotides and pulse-chase experiments. These methods have shown that newly synthesized DNA strands incorporate nucleotides at their 3' ends, confirming the directionality of synthesis. Additionally, the observation of Okazaki fragments on the lagging strand during replication further illustrates this directional process.
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Directionality
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