BackAnatomy and Physiology I (BIOL-109) Course Syllabus and Study Guide
Study Guide - Smart Notes
Tailored notes based on your materials, expanded with key definitions, examples, and context.
Course Overview
This course, Anatomy and Physiology I (BIOL-109), is the first in a two-semester sequence that provides a comprehensive study of the structure and function of the human body. The course covers biochemical, cellular, and tissue levels of organization, followed by the integumentary, nervous, endocrine, skeletal, and muscular systems. Laboratory exercises complement lecture topics through models, microscopy, dissection, and physiological studies. The curriculum aligns with the Human Anatomy and Physiology Society (HAPS) guidelines.
Course Structure and Assessment
Lecture Exams: 3 exams (100 points each, 42.9% of grade)
Laboratory Practical Exams: 2 exams (100 points each, 28.6% of grade)
Cumulative Final Exam: 125 points (17.9% of grade)
Attendance & Participation: 50 points (7.1% of grade)
Course Learning Objectives Assessments: 25 points (3.5% of grade)
Final Grade Calculation: Earned Points / 700 Points
Major Topics and Chapter Alignment
The following topics are covered, corresponding to the chapters in the Amerman textbook:
Ch. 1: Introduction to Anatomy and Physiology
Ch. 2: The Chemistry of Life
Ch. 3: The Cell
Ch. 4: Histology
Ch. 5: The Integumentary System
Ch. 6: Bones and Bone Tissue
Ch. 7: The Skeletal System
Ch. 8: Articulations
Ch. 9: The Muscular System
Ch. 10: Muscle Tissue and Physiology
Ch. 11: Introduction to the Nervous System and Nervous Tissue
Ch. 12: The Central Nervous System
Ch. 13: The Peripheral Nervous System
Ch. 14: The Autonomic Nervous System and Homeostasis
Ch. 15: The Special Senses
Ch. 16: The Endocrine System
Detailed Topic Outline
Introduction to Anatomy and Physiology
This section introduces the fundamental concepts of anatomy (structure) and physiology (function), the characteristics of living things, and the levels of biological organization from chemical to organismal. It also covers anatomical terminology, body planes, cavities, and the principles of homeostasis.
Key Terms: Anatomy, Physiology, Homeostasis, Feedback Loops
Levels of Organization: Chemical, Cellular, Tissue, Organ, Organ System, Organism
Homeostasis: The maintenance of a stable internal environment. Involves negative and positive feedback mechanisms.
Example: Regulation of body temperature via negative feedback.
The Chemistry of Life
This topic covers the basic chemistry necessary for understanding biological processes, including atomic structure, chemical bonds, reactions, and the properties of water, acids, bases, and buffers. It also introduces the four major classes of organic molecules: carbohydrates, lipids, proteins, and nucleic acids.
Key Terms: Atom, Element, Molecule, Ion, pH, Buffer
Types of Chemical Bonds: Ionic, Covalent, Hydrogen
Organic Molecules: Carbohydrates (energy), Lipids (membranes, energy storage), Proteins (structure, enzymes), Nucleic Acids (genetic information)
Example: The role of ATP as the primary energy currency of the cell.
The Cell
This section explores cell structure and function, including the plasma membrane, organelles, and the processes of membrane transport, protein synthesis, and cell division.
Cell Membrane: Phospholipid bilayer, fluid mosaic model
Transport Mechanisms: Passive (diffusion, osmosis, facilitated diffusion), Active (primary, secondary, vesicular)
Organelles: Nucleus, mitochondria, ribosomes, endoplasmic reticulum, Golgi apparatus, lysosomes, peroxisomes
Cell Cycle: Interphase, mitosis, cytokinesis
Example: Osmosis in red blood cells placed in hypotonic or hypertonic solutions.
Histology
Histology is the study of tissues. The four basic tissue types are epithelial, connective, muscle, and nervous tissue. This section also covers the extracellular matrix, cell junctions, and tissue repair.
Epithelial Tissue: Covers surfaces, lines cavities, forms glands
Connective Tissue: Supports, protects, binds other tissues (includes bone, cartilage, blood)
Muscle Tissue: Responsible for movement (skeletal, cardiac, smooth)
Nervous Tissue: Conducts electrical impulses, processes information
Membranes: Serous, synovial, mucous, cutaneous
The Integumentary System
This system includes the skin and its accessory structures (hair, nails, glands). It functions in protection, sensation, thermoregulation, and synthesis of vitamin D.
Layers of Skin: Epidermis (outer), dermis (inner), hypodermis (subcutaneous)
Accessory Structures: Hair, nails, sweat glands (eccrine, apocrine), sebaceous glands
Skin Pigmentation: Melanin, carotene, hemoglobin
Example: Eccrine glands are involved in thermoregulation through sweat production.
Bones and Bone Tissue
This section covers the structure, function, and classification of bones, bone tissue histology, bone formation and growth, and bone remodeling and repair.
Functions of Bone: Support, protection, movement, mineral storage, blood cell formation (hemopoiesis)
Bone Structure: Compact bone (osteons), spongy bone (trabeculae), long bone anatomy (diaphysis, epiphyses)
Bone Cells: Osteoblasts (build), osteocytes (maintain), osteoclasts (break down)
Bone Formation: Intramembranous and endochondral ossification
Example: Growth in length occurs at the epiphyseal plate.
The Skeletal System
The skeletal system includes the axial and appendicular skeletons. Students are expected to identify major bones and surface markings, and understand the functional anatomy of the skeleton.
Axial Skeleton: Skull, vertebral column, thoracic cage
Appendicular Skeleton: Limbs and girdles
Example: The femur is the longest bone in the body and part of the appendicular skeleton.
Articulations (Joints)
Articulations are the sites where two or more bones meet. This section covers the classification, structure, and function of joints, with emphasis on synovial joints and their movements.
Functional Classification: Synarthrosis (immovable), amphiarthrosis (slightly movable), diarthrosis (freely movable)
Structural Classification: Fibrous, cartilaginous, synovial
Synovial Joints: Joint cavity, articular capsule, synovial fluid, articular cartilage
Movements: Flexion, extension, abduction, adduction, rotation, circumduction
Example: The shoulder is a ball-and-socket synovial joint allowing multiaxial movement.
Muscle Tissue and Physiology
This section explores the types of muscle tissue, the structure of skeletal muscle fibers, the physiology of muscle contraction, and the sources of energy for muscle activity.
Types of Muscle: Skeletal (voluntary), cardiac (involuntary, heart), smooth (involuntary, walls of organs)
Muscle Fiber Structure: Sarcolemma, sarcoplasmic reticulum, myofibrils, sarcomeres
Contraction Mechanism: Sliding filament theory, excitation-contraction coupling, cross-bridge cycling
Energy Sources: ATP, creatine phosphate, glycolysis, aerobic metabolism
Example: Type I muscle fibers are slow-twitch, fatigue-resistant, and rely on aerobic metabolism.
The Muscular System
This topic focuses on the identification and function of major skeletal muscles, muscle actions, and the organization of the muscular system.
Major Muscle Groups: Head and neck, trunk, upper and lower limbs
Muscle Actions: Agonist, antagonist, synergist, fixator
Example: The biceps brachii is the agonist for elbow flexion.
Introduction to the Nervous System and Nervous Tissue
This section introduces the organization of the nervous system, neuron and neuroglia structure and function, and the basics of neural electrophysiology.
Divisions: Central (CNS) and Peripheral (PNS)
Neurons: Structure (cell body, dendrites, axon), classification, function
Neuroglia: Support cells in CNS and PNS
Membrane Potentials: Resting, graded, and action potentials
Example: Myelination increases the speed of action potential propagation (saltatory conduction).
The Central Nervous System
This section covers the structure and function of the brain and spinal cord, including protection, development, and major pathways for sensation and movement.
Brain Regions: Cerebrum, diencephalon, brainstem, cerebellum
Spinal Cord: Anatomy, meninges, tracts
Protection: Meninges, cerebrospinal fluid, blood-brain barrier
Example: The thalamus acts as a relay station for sensory information.
The Peripheral Nervous System
This section discusses the structure and function of peripheral nerves, cranial and spinal nerves, and reflex arcs.
Cranial Nerves: 12 pairs, each with specific sensory and/or motor functions
Spinal Nerves: 31 pairs, organized into plexuses
Reflex Arcs: Pathways mediating involuntary responses
Example: The patellar (knee-jerk) reflex is a monosynaptic stretch reflex.
The Autonomic Nervous System and Homeostasis
This section covers the sympathetic and parasympathetic divisions of the autonomic nervous system, their anatomy, neurotransmitters, and effects on target organs.
Sympathetic Division: "Fight or flight" responses
Parasympathetic Division: "Rest and digest" responses
Dual Innervation: Most organs receive input from both divisions
Example: The heart rate is increased by sympathetic and decreased by parasympathetic stimulation.
The Special Senses
This section introduces the anatomy and physiology of the special senses: olfaction, gustation, vision, hearing, and equilibrium.
Olfaction: Sense of smell, olfactory epithelium
Gustation: Sense of taste, taste buds
Vision: Eye anatomy, photoreceptors, image formation
Hearing and Equilibrium: Ear anatomy, cochlea, vestibular apparatus
Example: Rods and cones are photoreceptors in the retina responsible for vision in dim and bright light, respectively.
The Endocrine System
This section covers the major endocrine glands, hormone types, mechanisms of hormone action, and the role of the endocrine system in homeostasis.
Major Glands: Pituitary, thyroid, parathyroid, adrenal, pancreas, gonads, pineal
Hormone Types: Peptide (protein-based), steroid (lipid-based)
Mechanisms: Second messenger systems, direct gene activation
Example: Insulin lowers blood glucose by promoting cellular uptake of glucose.
Laboratory Component
Laboratory sessions reinforce lecture material through hands-on activities, including microscopy, anatomical models, dissections, and physiological experiments. Safety protocols require gloves and eye protection during dissections and chemical handling.
Course Policies and Resources
Attendance: Required for both lecture and lab; more than two lab absences result in course failure.
Academic Integrity: Strictly enforced; use of AI or unauthorized resources is prohibited.
Accommodations: Available through the Center on Disability.
Support Services: Learning Labs, Library, Computer Centers, Single Stop, and Starfish for academic and personal support.
Sample Grading Table
Grade | Points | Percentage |
|---|---|---|
A | > 626.15 | 89.5% or greater |
B | 556.15 – 626.14 | 79.5% – 89.49% |
C | 486.15 – 556.14 | 69.5% – 79.49% |
D | 416.15 – 486.14 | 59.5% – 69.49% |
F | < 416.15 | < 59.5% |
Study and Success Tips
Read assigned textbook chapters before class.
Review virtual lectures and prepare questions for in-person sessions.
Attend all labs and use models, microscopes, and slides for hands-on learning.
Actively participate in class and seek help from the instructor as needed.
Utilize campus resources for tutoring and academic support.
Additional info:
This guide is based on the course syllabus and departmental outline, providing a structured overview of the topics and expectations for Anatomy and Physiology I.
For detailed content, refer to the Amerman textbook and laboratory manual as assigned.