BackGeneral Biology: Foundations of Chemistry, Water, and Life
Study Guide - Smart Notes
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Introduction to Matter and Its States
Definition and Properties of Matter
Matter is anything that has mass and takes up space. It exists in several physical states, each with distinct properties.
Solid: Definite mass and definite shape.
Liquid: Definite mass but takes the shape of its container.
Gas (or Vapor): Definite mass but takes both the shape and volume of its container.
Plasma: Ionized gas, considered the fourth state of matter.
Example: Water exists as ice (solid), liquid water, and water vapor (gas).
Pure Substances and Mixtures
Matter can be classified as pure substances (elements and compounds) or mixtures (combinations of two or more substances).
Homogeneous Mixtures: Uniform composition throughout, such as solutions.
Heterogeneous Mixtures: Non-uniform composition, such as a mixture of liquid and solid.
Air: An example of a mixture.
Structure of the Atom
Atomic Components
An atom consists of a nucleus containing protons and neutrons, surrounded by electrons in orbitals.
Protons: Positively charged subatomic particles with mass.
Neutrons: Electrically neutral subatomic particles with mass.
Electrons: Negatively charged particles with very small mass, occupying distinct energy levels (orbitals).
Octet Rule
The octet rule states that atoms tend to gain, lose, or share electrons to achieve a full outer shell of eight electrons.
Cations: Positively charged ions (e.g., ).
Anions: Negatively charged ions (e.g., ).
Elements and the Periodic Table
Common Elements in Biology
C: Carbon
O: Oxygen
N: Nitrogen
S: Sulfur
P: Phosphorus
There are 118 known elements: 92 naturally occurring and 26 synthetic (man-made).
Periodic Table Overview
The periodic table organizes elements by atomic number and properties. First created by Dmitri Mendeleev, it shows trends in atomic weight and chemical behavior.
Atomic Number: Number of protons in the nucleus.
Atomic Mass: Sum of protons and neutrons.
Isotopes and Radioactivity
Isotopes are forms of an element with different numbers of neutrons, resulting in different atomic masses. Some isotopes are radioactive and emit particles:
Alpha particles: Helium nuclei ()
Beta particles: High-energy electrons
Gamma rays: High-frequency light rays
Atomic weights are weighted averages based on isotope abundance.
Light and the Electromagnetic Spectrum
Types of Electromagnetic Radiation
Light includes a range of electromagnetic waves:
Radio waves
Microwaves
Infrared rays
Visible light
Ultraviolet rays
X-rays
Gamma rays
These are ranked from low frequency/energy to high frequency/energy.
Molecules and Chemical Bonding
Covalent and Ionic Bonds
Molecules are formed by covalent bonding (sharing of electrons). Ionic compounds are formed by the attraction between positively and negatively charged ions.
Properties of Molecules
Boiling point
Melting point
Density (mass/volume)
Shape of molecule
Solubility
Polarity and Non-bonding Associations
Polar covalent bonds: Uneven distribution of electrons, leading to molecular polarity.
Non-polar covalent bonds: Even distribution of electrons.
Hydrogen bonding: Attraction between hydrogen and an electronegative atom (e.g., O, N); contributes to high boiling point.
Dipole-dipole interactions: Attraction between positive and negative poles of molecules.
Van der Waals forces: Weak, temporary dipole-dipole attractions.
Water: Properties and Biological Importance
Physical and Chemical Properties of Water
Water is essential for life due to its unique properties:
Boiling Point: 100°C
Melting Point: 0°C
Density: 1 g/cm3 (liquid)
Frozen water is less dense than liquid water
Bent geometry
Polar molecule
High heat of vaporization
Good solvent
Cohesive and adhesive forces
High surface tension
Water in Living Organisms
Water is vital for various physiological processes in humans:
Thirst
Digestion
Excretion
Blood circulation
Dehydration and water toxicity
Body Part | Percent Water |
|---|---|
Lungs | 90% |
Blood | 82% |
Skin | 80% |
Muscle | 75% |
Brain | 70% |
Bones | 22% |
Acids, Bases, and Buffers
Definitions and Properties
Acids: Release hydrogen ions () into solution.
Bases: Release hydroxide ions () into solution.
pH: Measures acidity; scale from 0 (very acidic) to 14 (very basic), with 7 as neutral.
pH Value | Classification |
|---|---|
0-6 | Acidic |
7 | Neutral |
8-14 | Basic |
Buffers
Buffers are chemicals that resist changes in pH when acids or bases are added. In humans, carbonic acid acts as a buffer to maintain metabolic stability.
Life Functions and Classification
Basic Life Functions
Growth
Nutrient gathering (nutrition)
Reproduction
Excretion
Transport
Regulation
Homeostasis: Regulation of internal environment
Classification Scheme
Domain
Kingdom
Phylum
Class
Order
Family
Genus
Species
The Scientific Method
Steps in Scientific Investigation
Observe and identify; use senses
Make a hypothesis (educated guess)
Design an experiment
Control group (everything except variable of interest)
Experimental group (contains variable of interest)
Collect data and analyze results
Avoid bias
Discuss results and draw conclusions
Accept or reject hypothesis
Cells and the Hierarchy of Life
Definition of a Living Cell
A living cell is capable of reproducing itself without external help. Viruses and prions are not considered living cells.
Eukaryotes vs. Prokaryotes
Eukaryotes: Have a true nucleus
Prokaryotes: Lack a nucleus
Biological Hierarchy
Biosphere
Ecosystem
Communities
Population
Species/Organism
Organ Systems
Organ
Tissue
Cell
Molecule
Atom
Additional info: Some explanations and examples have been expanded for clarity and completeness, such as the role of water in biological systems and the steps of the scientific method.