What is meant by the term chromatin remodeling? Describe the importance of this process to transcription.
Table of contents
- 1. Introduction to Genetics51m
- 2. Mendel's Laws of Inheritance3h 37m
- 3. Extensions to Mendelian Inheritance2h 41m
- 4. Genetic Mapping and Linkage2h 28m
- 5. Genetics of Bacteria and Viruses1h 21m
- 6. Chromosomal Variation1h 48m
- 7. DNA and Chromosome Structure56m
- 8. DNA Replication1h 10m
- 9. Mitosis and Meiosis1h 34m
- 10. Transcription1h 0m
- 11. Translation58m
- 12. Gene Regulation in Prokaryotes1h 19m
- 13. Gene Regulation in Eukaryotes44m
- 14. Genetic Control of Development44m
- 15. Genomes and Genomics1h 50m
- 16. Transposable Elements47m
- 17. Mutation, Repair, and Recombination1h 6m
- 18. Molecular Genetic Tools19m
- 19. Cancer Genetics29m
- 20. Quantitative Genetics1h 26m
- 21. Population Genetics50m
- 22. Evolutionary Genetics29m
13. Gene Regulation in Eukaryotes
Epigenetics, Chromatin Modifications, and Regulation
Problem 4
Textbook Question
What parts of the genome are reversibly methylated? How does this affect gene expression?

1
Understand that DNA methylation typically involves the addition of a methyl group to the 5' position of cytosine residues, often in CpG dinucleotides, and that this modification can be reversible in certain genomic regions.
Identify that the parts of the genome that are reversibly methylated include gene promoter regions, especially CpG islands, as well as enhancers and other regulatory elements.
Recognize that reversible methylation in these regions can regulate gene expression by influencing the binding of transcription factors and the recruitment of proteins that modify chromatin structure.
Explain that when promoter regions are methylated, gene expression is usually repressed because methylation can block transcription factor binding or attract proteins that compact chromatin, making the gene less accessible.
Conversely, when methyl groups are removed (demethylation), the chromatin becomes more open, allowing transcription factors to bind and activate gene expression, demonstrating how reversible methylation dynamically controls gene activity.

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Key Concepts
Here are the essential concepts you must grasp in order to answer the question correctly.
DNA Methylation
DNA methylation involves the addition of a methyl group to cytosine bases, typically at CpG sites, affecting gene regulation. This epigenetic modification can silence genes by preventing transcription factor binding or recruiting proteins that compact chromatin.
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Reversible Methylation of Regulatory Regions
Promoter regions and enhancers are parts of the genome where methylation is often reversible. Dynamic methylation changes in these regions can switch genes on or off in response to developmental cues or environmental factors.
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Impact on Gene Expression
Reversible methylation modulates gene expression by altering chromatin accessibility. When methyl groups are removed, chromatin relaxes, allowing transcription; when methylated, gene expression is typically repressed, enabling flexible control of cellular functions.
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