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Ch 10: Lipids – Structure, Function, and Biological Roles

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Lipids: Structure, Function, and Biological Roles

Introduction to Lipids

Lipids are a diverse group of hydrophobic or amphipathic molecules essential for energy storage, membrane structure, and signaling in biological systems. They include fatty acids, triacylglycerols, phospholipids, glycolipids, sterols, and fat-soluble vitamins.

Storage Lipids

Fatty Acids: Structure and Nomenclature

Fatty acids are carboxylic acids with long hydrocarbon chains, typically containing 4 to 36 carbon atoms. They can be saturated (no double bonds) or unsaturated (one or more double bonds), and may be branched or unbranched.

  • General Structure: A long hydrocarbon chain (hydrophobic) with a terminal carboxylic acid group (hydrophilic).

  • Nomenclature: Denoted as C:D(Δx,y,...) where C is the number of carbons, D is the number of double bonds, and Δx,y,... indicates the position of double bonds.

  • Omega Nomenclature: Double bonds are also described relative to the terminal methyl carbon (ω-carbon), e.g., omega-3 (ω-3) fatty acids.

Essential features of a fatty acid

Table: Some Naturally Occurring Fatty Acids

Carbon Skeleton

Structure

Systematic Name

Common Name

Melting Point (°C)

Solubility in Water (mg/L)

12:0

CH3(CH2)10COOH

n-Dodecanoic acid

Lauric acid

44.2

0.063

16:0

CH3(CH2)14COOH

n-Hexadecanoic acid

Palmitic acid

63.1

0.001

18:1(Δ9)

CH3(CH2)7CH=CH(CH2)7COOH

cis-9-Octadecenoic acid

Oleic acid

13.4

0.003

18:2(Δ9,12)

CH3(CH2)4CH=CHCH2CH=CH(CH2)7COOH

cis,cis-9,12-Octadecadienoic acid

Linoleic acid

-5

0.006

20:4(Δ5,8,11,14)

CH3...COOH

cis,cis,cis,cis-5,8,11,14-Eicosatetraenoic acid

Arachidonic acid

-49.5

0.005

Table of naturally occurring fatty acids

Physical Properties of Fatty Acids

  • Solubility: Decreases with increasing chain length and decreases with fewer double bonds.

  • Melting Point: Increases with chain length and decreases with unsaturation. Saturated fatty acids are waxy solids at room temperature, while unsaturated fatty acids are oily liquids.

Saturated and unsaturated fatty acids and their packing

Polyunsaturated Fatty Acids (PUFAs) and Human Nutrition

PUFAs contain more than one double bond. Omega-3 and omega-6 fatty acids are essential in the human diet, as they cannot be synthesized de novo.

  • Omega-3 (ω-3) Fatty Acids: First double bond between C-3 and C-4 from the ω-carbon.

  • Omega-6 (ω-6) Fatty Acids: First double bond between C-6 and C-7 from the ω-carbon.

  • Essential Fatty Acids: α-Linolenic acid (ALA), eicosapentaenoic acid (EPA), and docosahexaenoic acid (DHA).

Structure of eicosapentaenoic acid (EPA)

Triacylglycerols (Triglycerides)

Triacylglycerols are the main storage form of fatty acids, consisting of three fatty acids esterified to a glycerol backbone. They are nonpolar and hydrophobic, serving as energy reserves and insulation in animals and plants.

  • Simple Triacylglycerols: All three fatty acids are the same.

  • Mixed Triacylglycerols: Two or three different fatty acids.

  • Biological Role: Stored in adipocytes (animals) and seeds (plants).

Structure of a mixed triacylglycerol Adipose tissue storing triacylglycerols

Waxes

Waxes are esters of long-chain fatty acids with long-chain alcohols. They serve as energy stores and water repellents in nature, with higher melting points than triacylglycerols.

  • Examples: Beeswax, plant cuticles, and animal fur coatings.

Structure and function of waxes in nature

Structural Lipids in Membranes

Biological Membranes and Amphipathic Lipids

Biological membranes are composed of a double layer of amphipathic lipids, which have both hydrophobic and hydrophilic regions. The hydrophobic regions interact with each other, while the hydrophilic regions interact with water.

  • Major Classes: Phospholipids, glycolipids, and sterols.

Classification of storage and membrane lipids

Glycerophospholipids

Glycerophospholipids are the main structural lipids in membranes, consisting of two fatty acids esterified to glycerol and a phosphate group with a polar head group.

  • Phosphatidic Acid: The simplest glycerophospholipid, with a phosphate group as the head group.

  • Head Groups: Can be serine, ethanolamine, choline, inositol, or glycerol.

  • Fatty Acid Composition: Typically, C-1 is a saturated fatty acid, and C-2 is an unsaturated fatty acid.

Structure of L-glycerol 3-phosphate Table of common glycerophospholipids

Ether Lipids and Platelet-Activating Factor

Some glycerophospholipids contain ether-linked fatty acids. Plasmalogens and platelet-activating factor are biologically important ether lipids.

  • Plasmalogens: Contain an ether-linked alkene at C-1 of glycerol.

  • Platelet-Activating Factor: An ether lipid involved in inflammation and allergic responses.

Structures of plasmalogen and platelet-activating factor

Sphingolipids

Sphingolipids are membrane lipids derived from sphingosine, a long-chain amino alcohol. They have a polar head group and two nonpolar tails but lack glycerol.

  • Ceramide: The parent compound, formed by attaching a fatty acid to the amino group of sphingosine.

  • Sphingomyelins: Contain phosphocholine or phosphoethanolamine as the head group.

  • Glycosphingolipids: Have one or more sugars as the head group; important in cell recognition and signaling.

Table of common sphingolipids General structure of sphingolipids Comparison of phosphatidylcholine and sphingomyelin

Gangliosides and Biological Recognition

Gangliosides are glycosphingolipids with complex oligosaccharide head groups containing sialic acid residues. They are abundant in neuronal membranes and play roles in cell recognition, including blood group antigens.

Structures of gangliosides Blood group antigens and glycosphingolipids Legend for glycosphingolipid structures

Lipid Degradation

Phospholipids and sphingolipids are degraded in lysosomes by specific enzymes. Defects in these enzymes can lead to lysosomal storage diseases.

  • Phospholipases: Remove fatty acids from phospholipids.

  • Lysosomal Enzymes: Remove sugar units from gangliosides.

Phospholipase cleavage sites

Sterols

Sterols are structural lipids with a characteristic four-fused-ring system. Cholesterol is the major sterol in animal tissues, serving as a membrane component and precursor for steroid hormones and bile acids.

  • Cholesterol: Amphipathic molecule with a polar head group and nonpolar body.

  • Bile Acids: Derived from cholesterol, aid in fat digestion.

Structure of cholesterol Structure of taurocholic acid (a bile acid)

Lipids as Signals, Cofactors, and Pigments

Phosphatidylinositols and Sphingosine Derivatives as Intracellular Signals

Phosphatidylinositol and its phosphorylated derivatives (e.g., PIP2, PIP3) regulate cell structure and metabolism by serving as reservoirs and points of nucleation for signaling proteins. Sphingolipid derivatives such as ceramide regulate cell division, differentiation, and apoptosis.

Phospholipase cleavage of PIP2

Eicosanoids: Local Hormones Derived from Arachidonic Acid

Eicosanoids are paracrine hormones derived from arachidonic acid. They include prostaglandins, thromboxanes, leukotrienes, and lipoxins, each with distinct biological functions.

  • Prostaglandins: Five-membered ring; involved in inflammation, pain, and smooth muscle contraction.

  • Thromboxanes: Six-membered ring; involved in blood clot formation.

  • Leukotrienes: Linear with conjugated double bonds; mediate allergic and inflammatory responses.

  • Lipoxins: Linear with hydroxyl groups; anti-inflammatory agents.

Structure of thromboxane A2 Structure of lipoxin A4

Steroid Hormones

Steroid hormones are oxidized derivatives of sterols, more polar than cholesterol, and function as signaling molecules that regulate gene expression in target tissues.

  • Examples: Testosterone, estradiol, cortisol, aldosterone, prednisone, brassinolide.

Structures of common steroid hormones

Fat-Soluble Vitamins

Vitamins A, D, E, and K are lipid-soluble and essential for various biological functions.

  • Vitamin D: Synthesized from 7-dehydrocholesterol in the skin; regulates calcium metabolism.

  • Vitamin A: Derived from β-carotene; involved in vision and gene regulation.

  • Vitamin E (Tocopherols): Antioxidants that protect membrane lipids from oxidation.

  • Vitamin K: Essential for blood clotting; undergoes oxidation-reduction cycles.

Vitamin D3 synthesis and activation Structures of alpha- and beta-carotene Vitamin K structure

Lipid Quinones and Dolichols

Ubiquinone (coenzyme Q) and plastoquinone are isoprenoid quinones that function as electron carriers in mitochondrial and chloroplast electron transport chains. Dolichols anchor and activate sugars for the biosynthesis of complex carbohydrates, glycolipids, and glycoproteins.

Structures of ubiquinone and plastoquinone Structure of dolichol

Lipidic Pigments

Many natural pigments are lipids with conjugated double bonds (dienes), allowing them to absorb visible light. Examples include carotenoids, which are precursors to vitamin A.

Structures of alpha- and beta-carotene

Additional info: This guide covers the structure, classification, and biological roles of lipids, integrating textbook-level explanations and relevant visual aids for biochemistry students.

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