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Infection, Infectious Diseases, and Epidemiology: Core Concepts and Mechanisms

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Infection, Infectious Diseases, and Epidemiology

Symbiotic Relationships Between Microbes and Their Hosts

Microorganisms interact with their hosts in various ways, forming symbiotic relationships that can impact health and disease. Symbiosis refers to the close association between two different species living together.

  • Mutualism: Both organisms benefit from the relationship. Example: Bacteria in the human colon synthesize vitamins and receive nutrients.

  • Commensalism: One organism benefits, while the other is neither helped nor harmed. Example: Mites in human hair follicles.

  • Amensalism: One organism is harmed, while the other is unaffected. Example: Fungi secreting antibiotics that inhibit nearby bacteria.

  • Parasitism: One organism benefits at the expense of the other. Example: Mycobacterium tuberculosis in human lungs.

Type

Organism 1

Organism 2

Example

Mutualism

Benefits

Benefits

Bacteria in human colon

Commensalism

Benefits

Neither benefits nor is harmed

Mites in human hair follicles

Amensalism

Is harmed

Neither benefits nor is harmed

Fungus secreting an antibiotic, inhibiting nearby bacteria

Parasitism

Benefits

Is harmed

Tuberculosis bacteria in human lung

Table of types of symbiotic relationships

Microbiome of Humans

The human microbiome consists of all microorganisms that colonize the body's surfaces without causing disease under normal conditions. These are also called normal microbiota, normal flora, or indigenous microbiota.

  • Resident microbiota: Remain throughout life, mostly commensal.

  • Transient microbiota: Present for short periods; cannot persist due to competition, immune responses, or environmental changes.

Major sites of normal microbiota include the skin, eyes, upper respiratory tract, and digestive tract.

Resident microbiota of the upper respiratory tract Resident microbiota of the digestive tract Resident microbiota of the eyes and skin

Acquisition and Changes in the Microbiome

Humans are born without microbiota; colonization begins during birth and continues in the first months of life. The composition of the microbiome can change due to age, diet, environment, and health status.

Opportunistic Pathogens

Normal microbiota can become opportunistic pathogens under certain conditions, such as:

  • Introduction into unusual body sites

  • Immune suppression

  • Changes in the normal microbiota (e.g., antibiotic use)

  • Stressful conditions

Reservoirs of Infectious Diseases of Humans

Types of Reservoirs

Reservoirs are sites where pathogens are maintained as sources of infection. There are three main types:

  • Animal reservoirs: Pathogens that infect animals and can be transmitted to humans (zoonoses).

  • Human carriers: Infected individuals who may not show symptoms but can transmit pathogens.

  • Nonliving reservoirs: Soil, water, and food contaminated with infectious agents.

Zoonoses

Zoonoses are diseases that naturally spread from animal hosts to humans. Transmission can occur through direct contact, consumption, or vectors such as arthropods. Humans are often dead-end hosts for these pathogens.

Disease

Causative Agent

Animal Reservoir

Mode of Transmission

Tapeworm infestation

Dipylidium caninum

Dogs

Ingestion of larvae in dog saliva

Malaria

Plasmodium spp.

Monkeys

Bite of Anopheles mosquito

Rabies

Rabies virus

Bats, foxes, dogs

Bite of infected animal

Anthrax

Bacillus anthracis

Domestic livestock

Direct contact with infected animal

Yellow fever

Flavivirus spp.

Monkeys

Bite of Aedes mosquito

Table of common zoonoses

The Invasion and Establishment of Microbes in Hosts: Infection

Contamination vs. Infection

Contamination is the mere presence of microbes on or in the body, while infection occurs when microbes evade external defenses, multiply, and establish themselves in the host.

Stages of Infectious Diseases

Infectious diseases typically progress through several stages:

  • Incubation period: Time between infection and appearance of symptoms.

  • Prodromal period: Mild, general symptoms appear.

  • Illness: Most severe signs and symptoms.

  • Decline: Symptoms subside as immune response or treatment reduces pathogen numbers.

  • Convalescence: Recovery; no signs or symptoms remain.

Graph of stages of infectious diseases

Incubation Periods of Selected Infectious Diseases

Disease

Incubation Period

Staphylococcus foodborne infection

<1 day

Influenza

About 1 day

Cholera

2 to 3 days

Genital herpes

About 5 days

Tetanus

5 to 15 days

Syphilis

10 to 21 days

Hepatitis B

70 to 100 days

AIDS

1 to >8 years

Leprosy

10 to >30 years

Table of incubation periods of selected infectious diseases

The Movement of Pathogens Out of Hosts: Portals of Exit

Portals of Exit

Pathogens leave the host through specific portals of exit, often the same as portals of entry. These include secretions, excretions, and other bodily fluids.

Diagram of portals of exit in the human body

Modes of Infectious Disease Transmission

Overview of Transmission

Transmission is the movement of pathogens from a reservoir or portal of exit to another host's portal of entry. There are three main groups:

  • Contact transmission

  • Vehicle transmission

  • Vector transmission

Contact Transmission

  • Direct contact: Physical interaction between hosts (e.g., touching, kissing, sexual contact).

  • Indirect contact: Transmission via fomites (inanimate objects).

  • Droplet transmission: Spread via droplets of mucus from coughing, sneezing, or talking.

Droplet transmission from a sneeze

Vehicle Transmission

  • Airborne transmission: Pathogens travel more than 1 meter via aerosols (e.g., dust, droplets).

  • Waterborne transmission: Pathogens spread through contaminated water, often causing gastrointestinal diseases.

  • Foodborne transmission: Pathogens in or on foods, especially if improperly processed or stored.

  • Bodily fluid transmission: Pathogens in blood, urine, saliva, etc., can infect if they contact mucous membranes or broken skin.

Poorly stored foods can harbor pathogens

Vector Transmission

  • Biological vectors: Arthropods that transmit pathogens and serve as hosts for part of the pathogen's life cycle (e.g., mosquitoes, ticks).

  • Mechanical vectors: Arthropods that passively carry pathogens on their bodies (e.g., houseflies, cockroaches).

Vector

Disease

Causative Agent

Mosquitoes

Malaria, Yellow fever, Dengue

Plasmodium spp., Flavivirus spp.

Ticks

Lyme disease, Rocky Mountain spotted fever

Borrelia burgdorferi, Rickettsia rickettsii

Fleas

Bubonic plague

Yersinia pestis

Houseflies

Foodborne infections

Shigella spp., Salmonella spp., Escherichia coli

Cockroaches

Foodborne infections

Shigella spp., Salmonella spp., Escherichia coli

Table of biological arthropod vectors Table of mechanical arthropod vectors

Summary Table: Modes of Disease Transmission

Mode of Transmission

Examples of Diseases Spread

Direct Contact

Anthrax, herpes, syphilis

Indirect Contact

Common cold, enterovirus infections

Droplet Transmission

Whooping cough, strep throat

Airborne

Chicken pox, tuberculosis

Waterborne

Cholera, leptospirosis

Foodborne

Food poisoning, hepatitis A

Mechanical (vector)

E. coli diarrhea, salmonellosis

Biological (vector)

Chagas' disease, malaria, typhus

Table of modes of disease transmission

Additional info: Understanding these mechanisms is essential for controlling infectious diseases and preventing outbreaks in both clinical and public health settings.

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