27. Protists

In step 3 of the citric acid cycle, the enzyme isocitrate dehydrogenase is regulated by NADH. Compare and contrast the regulation of this enzyme with the regulation of phosphofructokinase in glycolysis.

Apply what you know of the relationship between the light-capturing reactions and the Calvin cycle to calculate the number of photons used to produce a new G3P and regenerate RuBP. (Assume 1 ATP is produced for each pair of electrons used to form NADPH.)

The text claims that the evolutionary history of protists can be understood as a series of morphological innovations that established seven distinct lineages, each of which subsequently diversified based on innovative ways of feeding, moving, and reproducing. Explain how the Alveolata support this claim.

Which of the following correctly identify a role of the ATP produced in the light-capturing reactions? Select True or False for each statement.

T/F It is used by rubisco to fix CO₂ to RuBP.

T/F It serves the same role as ATP produced by mitochondria.

T/F It is used to regenerate RuBP from G3P molecules.

T/F It is used to produce G3P molecules

Draw a chemical equation to represent the redox reaction that occurs when methane (CH₄) burns in the presence of oxygen (O₂). Identify the reactant that is reduced and the reactant that is oxidized. Of the four molecules that should be in your equation, point out the one that has bonds with the highest potential energy.

Consider the following:

Plasmodium has an unusual organelle called an apicoplast. Recent research has shown that apicoplasts are derived from chloroplasts via secondary endosymbiosis and have a large number of genes related to chloroplast DNA.

Glyphosate is one of the most widely used herbicides. It works by poisoning an enzyme located in chloroplasts.

Biologists are testing the hypothesis that glyphosate could be used as an antimalarial drug in humans.

How are these observations connected?

Early estimates suggested that the oxidation of glucose via aerobic respiration would produce 38 ATP. Based on what you know of the theoretical yields of ATP from cellular respiration, show how this total was determined. Why do biologists now think this amount of ATP per molecule of glucose is not achieved in cells?

Chlamydomonas is a unicellular green alga. How does it differ from a photosynthetic bacterium, which is also single-celled? How does it differ from a protozoan, such as an amoeba? How does it differ from larger green algae, such as sea lettuce (Ulva)?

Suppose a friend says that we don't need to worry about the rising temperatures associated with global climate change. She claims that increased temperatures will make planktonic algae grow faster and that carbon dioxide (CO₂) will be removed from the atmosphere faster. According to her, this carbon will be buried at the bottom of the ocean in calcium carbonate shells. As a result, the amount of carbon dioxide in the atmosphere will decrease and global warming will decline. Comment.

When placed at the perimeter of a maze with food in the center, the plasmodial slime mold Physarum polycephalum explores the maze, retracts branches from dead-end corridors, and then grows exclusively along the shortest path possible to the food. How does Physarum do this? One theory is that it leaves behind slime deposits—an externalized 'memory' that 'reminds' it not to retry dead ends. Which of the following best describes movement in Physarum?

a. Cilia propel the slime mold.

b. Flagella propel the slime mold.

c. The slime mold moves by amoeboid motion.

d. The slime mold moves by gliding motility.

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When placed at the perimeter of a maze with food in the center, the plasmodial slime mold Physarum polycephalum explores the maze, retracts branches from dead-end corridors, and then grows exclusively along the shortest path possible to the food. How does Physarum do this? One theory is that it leaves behind slime deposits—an externalized 'memory' that 'reminds' it not to retry dead ends.

Physarum is a plasmodial slime mold, whereas Dictyostelum is a cellular slime mold. Compare and contrast movement by the migrating slug stage of Dictyostelium to the plasmodial stage of Physarum.

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When placed at the perimeter of a maze with food in the center, the plasmodial slime mold Physarum polycephalum explores the maze, retracts branches from dead-end corridors, and then grows exclusively along the shortest path possible to the food. How does Physarum do this? One theory is that it leaves behind slime deposits—an externalized 'memory' that 'reminds' it not to retry dead ends.

Does an organism without a brain have the ability to use an externalized 'memory'—a spatial 'slime map' that the organism uses to avoid moving to regions where it has been before? Researchers addressed this question by placing a U-shaped trap between Physarum and its food (see diagram that follows). Twenty-three out of 24 slime molds reached the food when plain agar was used as the growth substrate. However, when the agar was coated with extracellular slime, only 8 of 24 found the food. The mean time in hours that it took the successful slime molds to reach the food when placed on plain agar or agar pre-coated with extracellular slime was compared (P=0.012). Use the P value provided to determine if the difference is significant or not. What conclusion can be drawn from the graph shown here?

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When placed at the perimeter of a maze with food in the center, the plasmodial slime mold Physarum polycephalum explores the maze, retracts branches from dead-end corridors, and then grows exclusively along the shortest path possible to the food. How does Physarum do this? One theory is that it leaves behind slime deposits—an externalized 'memory' that 'reminds' it not to retry dead ends.

Propose an experiment that would test whether the coating of extracellular slime changed the speed at which the slime mold moved across the substrate.

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When placed at the perimeter of a maze with food in the center, the plasmodial slime mold Physarum polycephalum explores the maze, retracts branches from dead-end corridors, and then grows exclusively along the shortest path possible to the food. How does Physarum do this? One theory is that it leaves behind slime deposits—an externalized 'memory' that 'reminds' it not to retry dead ends.

Develop simple experiments to test whether Physarum prefers (1) brightly lit or dark environments; (2) dry or moist conditions; (3) oats or sugar as a food source.